Accounting | Invoicing - Transaction processing fees through Paymode

Hello!

We’re a newly onboarded Aspire customer who previously used QB for all things. We’re trying to figure out how to treat electronic payments where there is a discounted amount, these are typically for the larger corporations where they discount the total paid monthly for “on time payments”, which reduces the total payment amount paid by the customer. Historically, we would add that discount into QBs and it would adjust the invoice. In Aspire, I’m not sure how to treat this. We can’t add this discount to the invoice before sending because then the customer would be paying 2x less by discounting an already discounted amount. 

My first thought is that we simply add the total amount paid minus the fee and our accountant needs to reconcile those separately at the end of each month balancing accordingly. But I’m open to hearing others ideas on how they’ve dealt with these operationally.